Author

Yija Jiang

Dana-Farber Cancer InstituteORCID 0000-0002-0239-6999Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Henry W. LongiD· 3 shared Myles A BrowniD· 3 shared Xintao QiuiD· 3 shared Paloma CejasiD· 2 shared Yingtian XieiD· 2 shared Adam SharpiD· 1 shared Alba Font‐TelloiD· 1 shared Alexander ZhuiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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3 shared papersCancer Biology

Henry W. LongORCID

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3 papers

Recent·Most cited

Cancer BiologyTheranosticsPeer-reviewedMay 18, 2026

Epigenetic Subtypes of High-Grade T1 Bladder Cancer Reveal Intra-Tumor Heterogeneity and Distinct Interactions with Tumor Microenvironment.

Joaquim Bellmunt B, Yingtian Xie, Nuria Juanpere-Rodero…·Paloma Cejas

This study identifies epigenetic subtypes of high-grade T1 bladder cancer using integrated chromatin and transcriptomic data, revealing intra-tumor heterogeneity and distinct tumor microenvironment interactions.

1 citation

humanbulk RNA-seq

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BioinformaticsGenomics Proteomics & BioinformaticsPeer-reviewedNov 24, 2025

scATAnno: Automated Cell Type Annotation for single-cell ATAC Sequencing Data

Yija Jiang, Zhirui Hu, Feng Lu…·Xintao Qiu

scATAnno automatically annotates scATAC-seq data using reference atlases, outperforming existing methods across multiple datasets.

14 citations

humanscATAC-seq

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Molecular BiologybioRxivPreprintOct 17, 2022

Targeting the BAG-1 family of co-chaperones in lethal prostate cancer.

Antje Neeb, Ines Figueiredo, Denisa Bogdan…·Adam Sharp

This study investigates Thio-2's mechanism of action in inhibiting AR signaling in CRPC, showing it acts independently of BAG-1 isoforms and with potential AR NTD binding.

DOI 10.1101/2022.10.17.512378

humanproteomics

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