Author
Wellcome Sanger InstituteORCID 0000-0002-0595-7333Unclaimed ORCID profile · follow to get notified of new preprints
7 papers
Recent·Most cited
Joyce Mwongeli Ngoi, Eniyou Cheryll Oriero, Eyyüb S. Ünlü…·Lucas N. Amenga-Etego (16916177)
The paper analyzes amplicon sequencing data from 17,384 Plasmodium falciparum samples in West Africa to characterize antimalarial resistance patterns and their geographic distribution.
Andrew J. Balmer, Chiyun Lee, Richard D. Pearson…·Jacob Almagro Garcia
Pf-PeptideFilter is a web-based tool that filters peptide vaccine candidates for Plasmodium falciparum using genomic and transcriptomic data to prioritize immunogenic targets.
Andrew J. Balmer, Nina F. D. White, Eyyüb S. Ünlü…·Cristina V. Ariani
This paper aggregates spatiotemporal data on 112,933 Plasmodium falciparum samples to track the global spread of artemisinin resistance, highlighting its emergence in East Africa and the role of genomic surveillance.
Chiyun Lee, Eyyüb S. Ünlü, Nina F. D. White…·Richard D. Pearson
Pf-HaploAtlas provides an interactive web tool for analyzing spatiotemporal genomic variation in Plasmodium falciparum using data from 16,203 samples across 33 countries.
Olivo Miotto, Alfred Amambua‐Ngwa, Lucas Naam-Kayagre Amenga-Etego…·Dominic P. Kwiatkowski
The paper identifies a cryptotype in Plasmodium falciparum genomes across Africa, characterized by a complex genetic background that is geographically widespread but genetically distinct.
Sophia T. Girgis, Edem Adika, Felix E. Nenyewodey…·William L. Hamilton
This study implements a Nanopore sequencing workflow for P. falciparum genomic surveillance in Ghana, identifying drug resistance patterns and vaccine antigen variations.
Sha Joe Zhu, Jacob Almagro Garcia, Gil McVean
The paper develops a statistical method to deconvolve multiple Plasmodium falciparum strains from sequencing data, enabling detailed analysis of mixed infections.