Katherine Rhodes

The paper identifies expression quantitative trait loci in 29 cell-types from heterogeneous differentiating cultures and characterizes regulatory dynamics across differentiation trajectories.

This study uses single-cell RNA-sequencing of embryoid bodies to compare gene expression across humans and chimpanzees, identifying conserved and species-specific regulatory genes.

The paper identifies lineage-specific dynamic eQTLs during human cardiomyocyte differentiation using single-cell RNA-seq and deconvolves bulk RNA-seq data to attribute dynamic effects to specific lineages.

The paper uses human embryoid bodies to study inter-individual regulatory differences across diverse cell types using single-cell RNA-sequencing.

The paper identifies gene-environment interactions in gene regulation across cell types and treatments, revealing many genes missed by GTEx.

The paper compares Drop-seq and DroNc-seq in profiling cardiomyocyte differentiation, finding similar cell types and trajectories in both methods.