Author

Alan Selewa

University of Chicago

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Anindita BasuiD· 3 shared Heather EckartiD· 3 shared Bingqing XieiD· 2 shared Ryan Dohn· 2 shared Sebastian PottiD· 2 shared Chenwei Tang· 1 shared Eric GauchatiD· 1 shared Ivan P. G. MoskowitziD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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3 shared papersGenomics

Anindita BasuORCID

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3 papers

Recent·Most cited

Single-cell genomics improves the discovery of risk variants and genes of Atrial Fibrillation

Alan Selewa, Kaixuan Luo, Michael Wasney, Linsin A. Smith, Xiaotong Sun, Chenwei Tang, Heather Eckart, Ivan P. G. Moskowitz, Anindita Basu, Xin He, Sebastian Pott

This study integrates single-cell epigenomics with GWAS to identify risk variants and genes for Atrial Fibrillation, highlighting key transcription factors and pathways.

Nature Communications · Aug 17, 2023Peer-reviewedGenetic & Genomic Medicine

mDrop-seq: Massively parallel single-cell RNA-seq of Saccharomyces cerevisiae and Candida albicans

Ryan Dohn, Bingqing Xie, Rebecca Back, Alan Selewa, Heather Eckart, Reeta P. Rao, Anindita Basu

The paper introduces mDrop-seq, a high-throughput scRNA-seq technique for yeast species, and demonstrates its use in profiling gene expression in Saccharomyces cerevisiae and Candida albicans under various conditions.

Vaccines · Dec 27, 2021Peer-reviewedGenomics

Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation

Alan Selewa, Ryan Dohn, Heather Eckart, Stephanie Lozano, Bingqing Xie, Eric Gauchat, Reem Elorbany, Katherine Rhodes, Jonathan E. Burnett, Yoav Gilad, Sebastian Pott, Anindita Basu

The paper compares Drop-seq and DroNc-seq in profiling cardiomyocyte differentiation, finding similar cell types and trajectories in both methods.

Scientific Reports · Jan 30, 2020Peer-reviewedGenomics