Author

Lu Shen

Peking UniversityORCID 0000-0002-0659-2399Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Lu Shen1 paper · Tongji University

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

De-Chang Yang· 2 shared Ge GaoiD· 2 shared Wei LiniD· 2 shared Zhi‐Jie CaoiD· 2 shared Alec R. ChapmaniD· 1 shared Ayjan Semayel· 1 shared David F. LeeiD· 1 shared Dong XingiD· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

De-Chang Yang

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

MicrobiologyJournal of VirologyPeer-reviewedAug 28, 2024

Coxsackievirus group B3 regulates ASS1-mediated metabolic reprogramming and promotes macrophage inflammatory polarization in viral myocarditis

Qiong Liu, Yinpan Shang, Ziwei Tao…·Xiaotian Huang

This study shows CVB3 infection upregulates ASS1 through citrulline consumption, leading to metabolic reprogramming and macrophage inflammatory polarization, contributing to viral myocarditis.

13 citations

mouseproteomics

𝕏 PostBluesky

BioinformaticsNature CommunicationsPeer-reviewedJul 10, 2020

Cell BLAST: Searching large-scale scRNA-seq databases via unbiased cell embedding

Zhi‐Jie Cao, Wei Lin, Lu Shen…·Ge Gao

Cell BLAST provides a tool for querying and annotating scRNA-seq data using a reference database and web interface.

151 citationstop 2%

scRNA-seqstatistical model

𝕏 PostBluesky

GenomicsbioRxivPreprintApr 12, 2020

Genomic Architecture of Cells in Tissues (GeACT): Study of Human Mid-gestation Fetus

Feng Tian, Fan Zhou, Xiang Li…·Xiaoliang Sunney Xie

The paper introduces GeACT, a genomic database for human mid-gestation fetus cells, linking gene expression to chromatin states and identifying key transcription factors.

5 citations

𝕏 PostBluesky