Author
University of California, Los AngelesORCID 0000-0002-1001-5316Unclaimed ORCID profile · follow to get notified of new preprints
4 papers
Recent·Most cited
Kostiantyn Dreval, Laura K. Hilton, Bruno M. Grande…·Ryan D. Morin
LCR-modules provides a flexible, automated suite of workflows for cancer genome analysis, supporting diverse sequencing types and enabling reproducible, scalable analysis of over 10,800 samples.
Toby M. Baker, Nedas Matulionis, Cassidy L. Andrasz…·Paul T. Spellman
ROCIT classifies tumor or non-tumor origin of reads from bulk long-read sequencing with high accuracy, improving somatic variant calling in tumors.
Yash Patel, Chenghao Zhu, Takafumi N. Yamaguchi…·Paul Christopher Boutros
Metapipeline-DNA automates comprehensive analysis of DNA sequencing data from raw reads to visualization, supporting germline and somatic genomic features.
Nicholas K. Wang, Nicholas Wiltsie, Helena K. Winata…·Paul Christopher Boutros
The paper quantifies the impact of genome build differences on variant calling and introduces StableLift, an algorithm to predict cross-build variant stability.