Author

Nathalie Conte

European Bioinformatics InstituteORCID 0000-0002-1010-3121Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Aikaterini ChatzipliiD· 1 shared Alan R WilliamsiD· 1 shared Alejandra N Gonzalez-BeltraniD· 1 shared Andrea BertottiiD· 1 shared Camille LaibeiD· 1 shared Carole GobleiD· 1 shared Chris A. MorrisiD· 1 shared Chris MungalliD· 1 shared

Activity by Year

2017-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

Aikaterini ChatzipliORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Integrative ensemble modelling of cetuximab sensitivity in colorectal cancer PDXs

Umberto Perron, Elena Grassi, Aikaterini Chatzipli, Marco Viviani, Emre Karakoç, Lucia Trastulla, Lorenzo M Brochier, Claudio Isella, Eugenia Rosalinda Zanella, Hagen Klett, Ivan Molineris, Julia B. Schüler, Manel Esteller, Enzo Médico, Nathalie Conte, , Francesco Iorio

The paper trains an ensemble classifier to predict cetuximab sensitivity in colorectal cancer PDXs using multi-omic data, achieving high accuracy and demonstrating its utility for therapeutic biomarker development.

Nature Communications · Nov 11, 2024Peer-reviewedBioinformatics

Identifiers for the 21st century:How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data

Julie A. McMurry, Nick Juty, Niklas Blomberg, Tony Burdett, Tom Conlin, Nathalie Conte, Mélanie Courtot, John Deck, Michel Dumontier, Donal K. Fellows, Alejandra N Gonzalez-Beltran, Philipp Gormanns, Jeffrey Sean Grethe, Janna Hastings, Henning Hermjakob, , Helen Parkinson

The paper outlines ten lessons for designing, provisioning, and reusing persistent identifiers to improve data integration in life sciences.

PLoS Biology · Jun 29, 2017Peer-reviewedBioinformatics