Author

Lucie Khamvongsa-Charbonnier

Centre National de la Recherche ScientifiqueORCID 0000-0002-1194-0546Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1 Research Focus:gene regulatory network inference· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Alice Corbet· 1 shared Charis Aubert· 1 shared Claire RioualeniD· 1 shared Jacques van HeldeniD· 1 shared Laurence RöderiD· 1 shared Laurent Kremmer· 1 shared Laurent PerriniD· 1 shared Loïc Crespo· 1 shared

Activity by Year

2017-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperPhysiology

Alice Corbet

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2 papers

Recent·Most cited

Metabolism fine tuning and cardiokines secretion represent adaptative responses of the heart to High Fat and High Sugar Diets in flies

Lucie Khamvongsa-Charbonnier, Laurent Kremmer, Magali Torres, Sallouha Krifa, Charis Aubert, Alice Corbet, Loïc Crespo, Laurence Röder, Laurent Perrin, Nathalie Arquier

The paper identifies genes and secreted proteins modulated by High Fat and High Sugar diets in Drosophila hearts, revealing adaptive responses to nutritional stress.

PLoS Genetics · Jun 11, 2026Peer-reviewedPhysiology

SnakeChunks: modular blocks to build Snakemakeworkflows for reproducible NGS analyses

Claire Rioualen, Lucie Khamvongsa-Charbonnier, Jacques van Helden

SnakeChunks provides modular Snakemake rules for reproducible NGS analyses, demonstrated on RNA-seq and ChIP-seq data.

bioRxiv · Jul 19, 2017 · PreprintBioinformatics