Samuel Miravet‐Verde

The paper introduces the Ocean Microbiomics Database (OMDB) to analyze microbial thermal niches and predict their response to ocean warming, showing richness declines faster than abundance.

The paper catalogs diazotroph genomes and analyzes their distribution across environments, identifying freshwater and sedimentary ecosystems as key nitrogen-fixation reservoirs.

The paper identifies a diverse microbial reservoir in the ultrasmall ocean fraction, including nitrogen-fixing diazotrophs, with implications for global biogeochemical cycles.

The paper examines latitudinal diversity gradients in the ocean microbiome, finding they are not universal but vary by taxa and environmental factors.

The paper estimates splicing factor activity from exon inclusion changes, identifying cancer-related splicing programs and their association with patient survival and cancer hallmarks.

This study assesses the microbial biosynthetic potential of reef-building corals using genome-resolved metagenomics, revealing host-specific microbiomes with high biotechnological value.

The paper introduces a transcriptomic marker gene-based classifier to predict bacterial growth states across species in microbial communities.

The paper uses single-cell perturbation screens to decode splicing factor regulatory networks, revealing cross-regulatory loops and MYC's role in linking cancer mutations to splicing regulation.

This study maps essentiality in Mycoplasma pneumoniae at near-single-nucleotide resolution using transposon libraries and k-means clustering, revealing essential domains and structural regions.

The paper maps E. coli capsule serotypes using genomic data, identifies novel K-types, and develops an in silico serotyping tool applicable to diverse E. coli genomes.

robustica computes robust independent components with customizable clustering and distance metrics, showing improved precision and efficiency in analyzing tumor samples.

The paper identifies Srrm3-dependent microexons as critical for photoreceptor function and vision, showing their role in outer segment maintenance and their loss leading to blindness.