Aida Andrades Valtueña

This study uses ancient whole-genome data to show geographically structured selection during the Neolithic transition in Western Eurasia, involving both farmer and hunter-gatherer alleles.

The paper adds standardized radiocarbon dating information to the AncientMetagenomeDir dataset, highlighting inconsistencies in radiocarbon reporting across ancient metagenomic studies.

This study uses ancient DNA to analyze the evolution of Streptococcus mutans over 8,000 years, showing that some virulence traits emerged with agricultural diets.

This study reconstructs the evolutionary history of ancient Salmonella enterica using 53 new genomes, revealing host adaptation events and convergent evolution in pathogenic lineages.

This study analyzes the global evolutionary patterns of Yersinia pestis, revealing its introduction into Africa and key genomic adaptations contributing to its persistence.

The paper introduces nf-core/eager, a Nextflow pipeline for ancient genome reconstruction, focusing on accessibility, reproducibility, and adaptability to modern practices.

The paper curates and standardizes metadata for ancient metagenomic samples to improve data retrieval and interoperability.

The paper identifies Salmonella enterica genomes from a 16th-century epidemic cemetery in Mexico, linking them to enteric fever as a cause of population decline.

This paper presents ancient DNA data from Northern Europe to reconstruct the genetic history of the region, showing earlier Anatolian farmer ancestry and the impact of steppe pastoralists.