The AlphaFold Database Ages
Ifigenia Tsitsa, Anja Conev, Alessia David…·Michael J.E. Sternberg
The paper highlights discrepancies between AlphaFold predictions and UniProt data, showing how bioinformatics resources can quickly become outdated.
Author
Imperial College LondonORCID 0000-0002-1884-5445Unclaimed ORCID profile · follow to get notified of new preprints
5 papers
Recent·Most cited
Ifigenia Tsitsa, Anja Conev, Alessia David…·Michael J.E. Sternberg
The paper highlights discrepancies between AlphaFold predictions and UniProt data, showing how bioinformatics resources can quickly become outdated.
Cecilia Pennica, Gordon Hanna, Suhail A. Islam…·Alessia David
Missense3D-PPI predicts the impact of missense variants on protein-protein interfaces using structural data, showing improved sensitivity over previous methods.
Alessia David, Nick Parkinson, Thomas P. Peacock…·Michael J.E. Sternberg
This paper identifies a common TMPRSS2 variant that reduces the risk of severe COVID-19 by impairing SARS-CoV-2 entry into cells.
Sirawit Ittisoponpisan, Shalip Yahangkiakan, Michael J.E. Sternberg, Alessia David
This study analyzes SARS-CoV-2 spike variants from Thailand, finding that novel variants do not significantly alter spike structure or ACE2 binding, and p.D614G became prevalent in the second outbreak.
Alessia David, Tarun Khanna, Melina Beykou…·Michael J.E. Sternberg
The paper analyzes TMPRSS2 variants and their potential impact on SARS-CoV-2 infection, showing that some variants may affect protein structure and function, and that TMPRSS2 and ACE2 are co-expressed in the gastrointestinal tract.