Author

Ying Ni

City University of Hong KongORCID 0000-0002-1920-7058Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Kaixin Chen· 1 shared Lu FaniD· 1 shared Qiutao DingiD· 1 shared Runsheng LiiD· 1 shared Xudong LiuiD· 1 shared Yanwen ShaoiD· 1 shared Yi YangiD· 1 shared Zhihao GuoiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Kaixin Chen

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1 paper

Recent·Most cited

Bacterial DNA methylation amplifies the shared A-to-G and G-to-A substitution bias in nanopore sequencing

Xudong Liu, Qiutao Ding, Yanwen Shao, Zhihao Guo, Ying Ni, Lu Fan, Yi Yang, Kaixin Chen, 杨梦苏, Runsheng Li

The paper identifies a shared A-to-G and G-to-A substitution bias in nanopore sequencing, amplified by bacterial DNA methylation, and shows this bias is concentrated around methylation motifs.

bioRxiv · Sep 10, 2026 · PreprintBioinformatics