Author

Biafra Ahanonu

University of California, San FranciscoORCID 0000-0002-2021-5848Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 3

Signature Assays, Organisms & Methods

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Organism:mouse· 3 Approach:experimental assay· 2 Assay:imaging· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Assay:electronic health records· 1 Approach:matrix factorization· 1 Approach:simulation· 1

Frequent Co-Authors

Alex A. LegariaiD· 1 shared Alexxai V. KravitziD· 1 shared Allan I. BasbaumiD· 1 shared Andrew CrowtheriD· 1 shared Artur KaniaiD· 1 shared Ben YangiD· 1 shared Bridget A. Matikainen‐AnkneyiD· 1 shared Claudia SchmuckermairiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperNeuroscience

Alex A. LegariaORCID

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3 papers

Recent·Most cited

NeuroscienceNature MethodsPeer-reviewedNov 12, 2024

Long-term optical imaging of the spinal cord in awake, behaving animals

Biafra Ahanonu, Andrew Crowther, Artur Kania…·Allan I. Basbaum

This study develops a method to image the spinal cord in awake, behaving mice over long periods, enabling monitoring of neural activity and behavior.

40 citationstop 2%

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NeuroscienceNature NeurosciencePeer-reviewedAug 30, 2022

Striatal fiber photometry reflects primarily non-somatic activity

Alex A. Legaria, Bridget A. Matikainen‐Ankney, Ben Yang…·Alexxai V. Kravitz

This study shows that striatal fiber photometry signals mainly reflect non-somatic calcium changes, not somatic ones.

108 citationstop 1%

mouseelectronic health records

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NeurosciencebioRxivPreprintMar 24, 2021

✦ In-depth digest

Fast, scalable, and statistically robust cell extraction from large-scale neural calcium imaging datasets

Fatih Dinç, Hakan Inan, Oscar Hernandez…·Mark J. Schnitzer

EXTRACT, a GPU-based cell extraction method using one-sided Huber robust regression, processed 199 Allen Brain Observatory sessions (~12 TB) in a day and gave cleaner traces than CAIMAN or CNMF-E.

51 citations

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