Author

John A. Hammond

The Pirbright InstituteORCID 0000-0002-2213-3248Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:genome assembly· 2 Assay:proteomics· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:host-pathogen & immune response· 1 Organism:plant (other)· 1

Frequent Co-Authors

John C. SchwartziD· 2 shared Abigail L. HayiD· 1 shared Adam M. PhillippyiD· 1 shared Ahmed TibaryiD· 1 shared Andrew Kelvin SewelliD· 1 shared Arang RhieiD· 1 shared Ayush UpadhyayiD· 1 shared Babatunde EkundayoiD· 1 shared

Activity by Year

2021-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersGenomics

John C. SchwartzORCID

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4 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 30, 2025

Bighorn sheep T2T genome assembly reveals differences in immune genes: a potential cause of high morbidity due to respiratory pathogens

Temitayo Olagunju, Mariia Pospelova, John C. Schwartz…·Brenda M. Murdoch

This paper presents a telomere-to-telomere genome assembly of bighorn sheep, revealing immune gene differences that may explain their susceptibility to respiratory pathogens.

2 citations

bacteria (other)whole-genome sequencing

MicrobiologybioRxivPreprintSep 3, 2025

Understanding the future risk of bat coronavirus spillover into humans: correlating sarbecovirus receptor usage, host range, and antigenicity.

Nazia Thakur, Joseph Newman, Dongchun Ni…·Dalan Bailey

This study examines the host range and antigenicity of bat sarbecoviruses, finding that generalist ACE2 users are more related to SARS-CoV-2 and show broader cross-neutralization.

3 citations

proteomicsexperimental assay

GenomicsbioRxivPreprintOct 4, 2023

A highly-contiguous genome assembly of the inbred Babraham pig (Sus scrofa) quantifies breed homozygosity and illuminates porcine immunogenetic variation

John C. Schwartz, Colin P. Farrell, Graham Freimanis…·John D. Phillips

The paper presents a highly contiguous genome assembly of the inbred Babraham pig, confirming homozygosity and characterizing immunogenetic variation.

DOI 10.1101/2023.10.04.560872

plant (other)whole-genome sequencing

BioinformaticsbioRxivPreprintSep 22, 2021

IgMAT: immunoglobulin sequence multi-species annotation tool for any species including those with incomplete antibody annotation or unusual characteristics.

Daniel L. W. Dorey-Robinson, Giuseppe Maccari, Richard Borne, John A. Hammond

IgMAT annotates immunoglobulin sequences across species by using a reduced amino acid alphabet and user-defined databases to handle incomplete or unusual antibody annotations.

2 citations

proteomicsstatistical model