Author

Magdalena A. Machnicka

University of WarsawORCID 0000-0002-2257-2961Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1

Frequent Co-Authors

Ángel BarcoiD· 2 shared Bartek WilczyńskiiD· 2 shared Federico MiozzoiD· 2 shared Marcelina KurowskaiD· 2 shared Aleksander JankowskiiD· 1 shared André FischeriD· 1 shared Anne‐Laurence BoutillieriD· 1 shared Beatriz del BlancoiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersNeuroscience

Ángel BarcoORCID

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3 papers

Recent·Most cited

NeuroscienceMolecular NeurobiologyPeer-reviewedJan 1, 2026

Systematic review and transcriptomic meta-analysis of environmental enrichment reveal core molecular programs of brain plasticity

Marcelina Kurowska, Federico Miozzo, Robert Schroeder…·Bartek Wilczyński

This study performs a systematic review and transcriptomic meta-analysis of environmental enrichment in rodents, identifying core molecular programs associated with brain plasticity.

DOI 10.1007/s12035-026-06133-y

mousebulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintApr 25, 2025

Trans-homologous interactions identified in Hi-C data are associated with embryonic development

Magdalena A. Machnicka, Aleksander Jankowski

The paper identifies trans-homologous chromatin interactions in Drosophila Hi-C data and links them to regulatory regions and developmental processes.

DOI 10.1101/2025.04.25.648339

DrosophilaHi-C

𝕏 PostBluesky

NeurosciencebioRxivPreprintFeb 11, 2025

Rearing conditions bidirectionally modulate cognitive abilities and AP-1 signaling in hippocampal neurons in a cell type-specific manner.

Marta Alaiz-Noya, Federico Miozzo, Miguel Fuentes-Ramos…·Ángel Barco

The paper shows that environmental enrichment and impoverishment affect cognitive abilities and AP-1 signaling in hippocampal neurons differently depending on cell type.

DOI 10.1101/2025.02.11.637399

mousebulk RNA-seq

𝕏 PostBluesky