Author

Shishir Kumar Gupta

Cluster of Excellence on Plant SciencesORCID 0000-0002-2335-1597Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:development & morphogenesis· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:fungi (other)· 1 Research Focus:gene regulatory network inference· 1 Assay:metabolomics· 1

Frequent Co-Authors

Axel A. BrakhageiD· 1 shared Mary NgigiiD· 1 shared Mather Ali KhaniD· 1 shared Mugdha SrivastavaiD· 1 shared Özge OsmanoğluiD· 1 shared Petra BaueriD· 1 shared Ricarda RemusiD· 1 shared Thomas DandekariD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 16 mutual co-author links

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1 shared paperBioinformatics

Axel A. BrakhageORCID

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2 papers

Recent·Most cited

Age-dependent differential iron deficiency responses of rosette leaves during reproductive stages in Arabidopsis thaliana

Mary Ngigi, Mather Ali Khan, Ricarda Remus, Shishir Kumar Gupta, Petra Bauer

This study examines how rosette leaves in Arabidopsis thaliana respond to iron availability during reproductive stages, showing distinct growth, elemental content, and gene expression patterns between young and old leaves.

Journal of Experimental Botany · May 21, 2025Peer-reviewedPlant Biology

Aspergillus fumigatus versus Genus Aspergillus: Conservation, adaptive evolution and specific virulence genes

Shishir Kumar Gupta, Mugdha Srivastava, Özge Osmanoğlu, Zhuofei Xu, Axel A. Brakhage, Thomas Dandekar

The paper identifies positively selected genes in Aspergillus fumigatus and related species, highlighting their roles in virulence, immune evasion, and adaptation.

Microorganisms · Sep 23, 2021Peer-reviewedBioinformatics