Author

Shengjie Yang

The University of Texas Southwestern Medical CenterORCID 0000-0002-2403-7911Unclaimed ORCID profile · follow to get notified of new preprints

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Shengjie Yang1 paper · University of Pittsburgh

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Cancer Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:transformer / foundation model· 1

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Bruce A. PosneriD· 1 shared Deepak NijhawaniD· 1 shared Guanghua XiaoiD· 1 shared Jingwei HuangiD· 1 shared Jiwoong KimiD· 1 shared Ling CaiiD· 1 shared Prema Latha MallipeddiiD· 1 shared Rongqing YuaniD· 1 shared

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2025-2025 · peak 1/yr

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1 shared paperCancer Biology

Bruce A. PosnerORCID

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1 paper

Recent·Most cited

Cancer BiologybioRxivPreprintMar 31, 2025

Attention Guided Mechanism Interpretable Drug-Gene Interaction (MIDI) Modeling for Cancer Drug Response Prediction and Target Effect Explanation

Tingyi Wanyan, Ling Cai, Deepak Nijhawan…·Yang Xie

This paper introduces MIDI, a model that predicts cancer drug response and explains drug-target interactions using an attention mechanism, outperforming existing methods in prediction and interpretability.

DOI 10.1101/2025.03.31.646490

humanbulk RNA-seq

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