Author

Yi Han Tan

Max Planck Institute for BiologyORCID 0000-0002-2461-1901Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Genomics· 2 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Ezgi AtayiD· 2 shared Ruth E. LeyiD· 2 shared Akshat JoshipuraiD· 1 shared Alexander TyakhtiD· 1 shared Alina Prokipchuk· 1 shared Amanda Hui Qi NgiD· 1 shared Andrew T. GewirtziD· 1 shared Aurélie CenieriD· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Ezgi AtayORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

GenomicsbioRxivPreprintMar 26, 2026

Extensive genomic diversity in Desulfovibrio species reveals species-specific functional traits associated with disease

Tingting Zheng, Isabel Keidel, Hélène Omer…·Melanie Schirmer

The paper compiles 2,658 Desulfovibrio genomes from 90 diseases and 32 countries to identify species-specific functional traits linked to inflammatory diseases.

DOI 10.64898/2026.03.24.713149

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

MicrobiologybioRxivPreprintFeb 21, 2025

Flagellin in the human gut microbiome is a diet-adjustable adjuvant for vaccination

Kelsey E. Huus, Yi Han Tan, Hirohito Abo…·Ruth E. Ley

This study shows that gut microbiome flagellin affects vaccine reactogenicity and can be influenced by diet.

1 citation

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintJun 19, 2018

Gut microbiome recovery after antibiotic usage is mediated by specific bacterial species

Tannistha Nandi, Ivor Russel Lee, Tarini Shankar Ghosh…·Niranjan Nagarajan

The paper identifies specific bacterial species associated with gut microbiome recovery after antibiotic use and shows their role in promoting microbial diversity and preventing pathogen colonization.

6 citations

mousemetagenomics

𝕏 PostBluesky