Author

Qiaoxing Liang

Fudan UniversityORCID 0000-0002-2876-3013Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Research Focus:cell type annotation· 2 Organism:human· 2 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Huijue JiaiD· 2 shared Lili Li· 2 shared Ruidong Guo· 2 shared Xihong LaniD· 2 shared Bin ZouiD· 1 shared Fei LiiD· 1 shared Guoping Zhao· 1 shared Guoping ZhaoiD· 1 shared

Activity by Year

2020-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersMicrobiology

Huijue JiaORCID

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3 papers

Recent·Most cited

Precision culturomics enabled by unlabeled single-cell morphology and Raman spectra

Qiaoxing Liang, Xihong Lan, Jiayi Wu, Wei Wei, Lili Li, Xiaofang Tang, Guoping Zhao, Ruidong Guo, Huijue Jia

This paper introduces a precision culturomics method using single-cell morphology and Raman spectra to sort and analyze microbial cells, revealing antibiotic-driven resistance and mutations in gut commensals.

Nature Communications · Jun 20, 2026Peer-reviewedMicrobiology

Microbial single-cell omics in situ

Xihong Lan, Qiaoxing Liang, JINHUA HE, Jiang Wu, Xiaoying Zhang, Fei Li, Lili Li, Guoping Zhao, Ruidong Guo, Huijie Jia

The paper reports a method using LIFT technology to obtain high-quality microbial single-cell genomes or transcriptomes from complex samples and demonstrates its application to study cell-fate commitment in sporulation.

Cell Genomics · Jan 22, 2026Peer-reviewedMicrobiology

DeepMicrobes: taxonomic classification for metagenomics with deep learning

Qiaoxing Liang, Paul W. Bible, Yu Liu, Bin Zou, Lai Wei

DeepMicrobes uses deep learning to classify metagenomic sequencing reads into microbial species, outperforming existing tools.

NAR Genomics and Bioinformatics · Feb 19, 2020Peer-reviewedBioinformatics