Integrating bacterial genomics and host transcriptomics links Burkholderia pseudomallei variation to melioidosis mortality and neutrophil responses
Arin Wongprommoon, Phumrapee Boonklang, Katie L Burnham…·Claire Chewapreecha
Author
Wellcome Sanger InstituteORCID 0000-0002-2881-8184Unclaimed ORCID profile · follow to get notified of new preprints
7 papers
Recent·Most cited
Arin Wongprommoon, Phumrapee Boonklang, Katie L Burnham…·Claire Chewapreecha
Haerin Jang, Catherine Sutherland, Wanseon Lee…·Emma E. Davenport
The paper constructs a multi-ancestry single-cell eQTL map for SLE, identifying colocalized eQTLs with GWAS loci and highlighting cell-type-specific regulatory mechanisms.
Haerin Jang, Norzawani B Buang, Catherine Sutherland…·Emma E. Davenport
This study uses single-cell profiling to track B cell depletion and repopulation in SLE patients after rituximab treatment, revealing changes in B cell subsets and immune cell dynamics.
Thomas Vanderstichele, Katie L. Burnham, Niek de Klein…·Emma E. Davenport
The paper identifies misexpression of inactive genes in whole blood and links it to nearby rare structural variants using RNA and genome sequencing data.
Katie L. Burnham, Nikhil Milind, Wanseon Lee…·Sarah Mappleback
The paper identifies eQTLs and regulatory networks linking genetic variation to transcriptomic responses in sepsis, highlighting key regulators like HIF1A and CEBPB.
James J. Gilchrist, Seiko Makino, Vivek Naranbhai…·Benjamin Peter Fairfax
The paper identifies eQTL specific to NK cells and links them to autoimmunity through transcriptome-wide association studies.
Hussein Al-Mossawi, Nicole Yager, Chelsea Taylor…·Benjamin P Fairfax
The paper investigates how a genetic variant affects IL7R expression and soluble receptor secretion in monocytes under inflammatory conditions.