Author

Tracey Jooste

Biomedical Research Institute (BMRI), Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa;ORCID 0000-0002-2902-4175Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Anca DorhoiiD· 1 shared Armand V. PeetersiD· 1 shared Ayanda ShabanguiD· 1 shared Brigitte GlanzmanniD· 1 shared Caroline T. TiemesseniD· 1 shared Craig Douman· 1 shared Craig John KinneariD· 1 shared Daniel R. De Wet· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperImmunology

Anca DorhoiORCID

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2 papers

Recent·Most cited

Spatial transcriptomics of pediatric tuberculosis lymph nodes reveals a conserved hypoxia_SPP1 niche

S Odunola Adebiyi, Pierre Goussard, Daniel R. De Wet, Jacques T. Janson, Tracey Jooste, Ayanda Shabangu, Anca Dorhoi, Stephen Bondoc, Michael Nekorchuk, Michael C. Chao, Sarah M. Fortune, Kathleen Busman-Sahay, Jacob D. Estes, Elya A. Shamskhou, Kevin B Urdahl, , Nelita Du Plessis

This study uses spatial transcriptomics to identify a hypoxia-associated SPP1-enriched microenvironment in pediatric TB granulomas that may contribute to incomplete bacterial clearance.

bioRxiv · Nov 3, 2026 · PreprintImmunology

Human Whole Genome Sequencing in South Africa

Brigitte Glanzmann, Tracey Jooste, Samira Ghoor, Richard Keith Gordon, Rizwana Mia, Jun Xia Mao, Hao Li, Patrick Charls, Craig Douman, Maritha J. Kotze, Armand V. Peeters, Glaudina Loots, Monika Esser, Caroline T. Tiemessen, Robert John Wilkinson, , Craig John Kinnear

The paper reports the first six human whole genome sequences generated and analyzed locally in South Africa, demonstrating high-quality data comparable to international standards.

Scientific Reports · Jan 12, 2021Peer-reviewedGenomics