Mirko Pavicic

Genotype-predicted drug response phenotypes and their co-occurrence with dispensed medicines among 738,531 participants in the UK Our Future Health study

The paper assesses the co-occurrence of actionable pharmacogenomic phenotypes with dispensed medicines in 738,531 UK participants, finding 36.8% had gene-matched medications.

Which plant traits increase soil carbon sequestration? Empirical evidence from a long-term poplar genetic diversity trial

This study identifies root elemental content as a key trait influencing soil carbon sequestration in a poplar genetic diversity trial.

Telomere-to-telomere assemblies reveal complex adaptive variation of 3-ketoacyl-CoA-synthases in Populus trichocarpa likely driven by helitrons

The paper uses long-read sequencing to analyze telomere-to-telomere assemblies in Populus trichocarpa, revealing complex KCS gene variation and its association with helitron transposons.

Population and adaptation history of 739 Thlaspi arvense natural accessions

The paper analyzes 739 Thlaspi arvense accessions to uncover genetic variation and adaptation mechanisms, identifying genomic regions linked to agronomic traits and climate resilience.

RWRtoolkit: multi-omic network analysis using random walks on multiplex networks in any species

RWRtoolkit enables multi-omic network analysis using random walks on multiplex networks across any species, providing tools for topological analysis and statistical evaluation.

MENTOR: Multiplex Embedding of Networks for Team-Based Omics Research

MENTOR is a network-based algorithm that partitions gene sets into functions and identifies biological functions in Populus trichocarpa associated with microbial abundance using supervised and unsupervised learning.

Digging deeper into GWAS signal using GRIN implicates additional genes contributing to suicidal behavior

This study relaxes GWAS significance thresholds and uses GRIN to identify additional genes linked to suicidal behavior, which replicate across cohorts and show stronger biological connections.

Functional Immune Deficiency Syndrome via Intestinal Infection in COVID-19

The paper uses a systems biology approach to analyze COVID-19 data and identifies non-respiratory infection pathways as key to its global spread.