Jane S. Richardson

RNAprecis: Prediction of full-detail RNA conformation from the experimentally best-observed sparse parameters

The paper introduces RNAprecis, an algorithm that predicts detailed RNA conformations from low-resolution experimental data, showing improved performance on outlier cases.

Categorizing prediction modes within low-pLDDT regions of AlphaFold2 structures

This paper identifies three prediction modes in low-pLDDT regions of AlphaFold2 structures and develops a tool to annotate and visualize them for improved interpretation.

Cis-nonPro Peptides: Genuine Occurrences and their Functional Roles

This paper identifies genuine cis-nonPro peptides using high-resolution data and quality filtering, revealing their functional roles in critical biological sites and carbohydrate-binding proteins.

Making the invisible enemy visible

The paper describes the rapid structural determination of SARS-CoV-2 proteins during the pandemic and the efforts to evaluate and improve these structures for drug and vaccine development.

Improved chemistry restraints for crystallographic refinement by integrating the Amber force field into Phenix

The paper integrates the Amber force field into Phenix for crystallographic refinement, improving model quality through better stereochemistry, fewer clashes, and better hydrogen bonds.