Author

Aditya Bagrodia

University of California San DiegoORCID 0000-0002-3358-1193Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Assay:spatial transcriptomics· 2 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:metabolism & bioenergetics· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Amirali SalmasiiD· 1 shared Andrew P. BartkoiD· 1 shared Benjamin J. HuangiD· 1 shared Deion Pena· 1 shared Diana J. LairdiD· 1 shared Ernesto J. RojasiD· 1 shared Haiyan Zhang· 1 shared Iveta Kalcheva· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperCancer Biology

Amirali SalmasiORCID

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2 papers

Recent·Most cited

Spatial transcriptomics reveals site-specific cellular and metabolic heterogeneity in bladder carcinoma in situ

Tyler D. Myers, Amirali Salmasi, Margaret Frances Meagher, Sarah Azari, Sonya Donato, Iveta Kalcheva, Se Jin Song, Haiyan Zhang, Kit L. Yuen, Aditya Bagrodia, Tyler F Stewart, Michael A. Liss, Andrew P. Bartko

This study uses spatial transcriptomics to show that bladder carcinoma in situ has spatially structured cellular and metabolic heterogeneity within a single patient.

bioRxiv · Aug 31, 2026 · PreprintCancer Biology

Integrated single-nuclei and spatial transcriptomic profiling of human sacrococcygeal teratomas reveals heterogeneity in cellular composition and X-chromosome inactivation

Ernesto J. Rojas, Krinio Giannikou, Benjamin J. Huang, Soo‐Jin Cho, Marco Cordero, Deion Pena, Lan Vu, Aditya Bagrodia, Sarkis Christopher Derderian, Tippi C. MacKenzie, Diana J. Laird

This study uses single-nuclei RNA-seq and spatial transcriptomics to analyze human sacrococcygeal teratomas, revealing cellular heterogeneity and X-chromosome inactivation patterns linked to sex bias.

bioRxiv · Jul 21, 2025 · PreprintCancer Biology