Éric Tannier

This study sequences the giant Y chromosome of Silene latifolia and reveals its structure, function, and evolutionary history.

This paper shows that horizontal gene transfer methods can detect ghost lineages in phylogenies, revealing hidden diversity despite lack of genomic data.

GOntact uses chromatin contact data to predict CRE target genes and their Gene Ontology enrichments, showing more specific functional annotations than genomic proximity.

Treerecs is a phylogenetic software that performs duplication-loss reconciliation to root gene trees and correct alignment uncertainties.

The paper improves Anopheles genome assemblies using comparative genomics methods and experimental data, resulting in more contiguous and chromosomally anchored assemblies.

Zombi simulates species, genomes, and sequences evolution, including extinct lineages and speciation/extinction rate variations.