Nima Rafati

Oligodendroglia vulnerability in the human dorsal striatum in Parkinson's disease

The paper uses snRNA-seq and spatial transcriptomics to study oligodendroglia in Parkinson's disease, identifying disease-specific subclasses and transcriptomic changes linked to myelin integrity and cell communication.

Optimizing Xenium In Situ data utility by quality assessment and best practice analysis workflows

This study evaluates the Xenium In Situ spatial transcriptomics platform using mouse brain and human breast cancer datasets, comparing it to other technologies and benchmarking analysis tools.

Moderate Nucleotide Diversity In The Atlantic Herring Is Associated With A Low Mutation Rate

The paper estimates the mutation rate in Atlantic herring and explains its moderate nucleotide diversity despite large population size.

A computational method for detection of structural variants using Deviant Reads and read pair Orientation: DevRO

DevRO detects structural variants in multiple populations using paired-end mapping and depth of coverage without pairwise comparisons.