Author

Pedro Barbosa

University of LisbonORCID 0000-0002-3892-7640Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Alcides FonsecaiD· 1 shared Ana Cláudia RaposoiD· 1 shared Ana Rita GrossoiD· 1 shared Annalisa MupoiD· 1 shared David Oxley· 1 shared Frederico ÁguaiD· 1 shared Joana JeremiasiD· 1 shared Maria AreziD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Alcides FonsecaORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Erosion of X-Chromosome Inactivation in female hiPSCs is heterogeneous and persists during differentiation

Ana Cláudia Raposo, Paulo Caldas, Maria Arez, Joana Jeremias, Pedro Barbosa, Rui Sousa‐Luís, Frederico Água, David Oxley, Annalisa Mupo, Mélanie A. Eckersley-Maslin, Miguel Casanova, Ana Rita Grosso, Simão Teixeira da Rocha

This study shows XCI erosion in female hiPSCs is common, heterogeneous, and persists during differentiation, affecting X-linked gene expression without altering DNA methylation levels.

bioRxiv · Mar 15, 2024 · PreprintMolecular Biology

Computational prediction of human deep intronic variation

Pedro Barbosa, Rosina Savisaar, Maria Carmo‐Fonseca, Alcides Fonseca

This study evaluates computational tools for predicting the functional impact of deep intronic variants, finding significant differences in performance and highlighting the trade-off between interpretability and predictive power.

GigaScience · Dec 28, 2022Peer-reviewedBioinformatics