Author

Nitya Ramkumar

Duke Medical CenterORCID 0000-0002-4086-4562Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:zebrafish· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Assay:imaging· 1 Research Focus:spatial domain detection· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Kenneth D. PossiD· 2 shared Stefano Di TaliaiD· 2 shared Anna T. Chao· 1 shared Christian Richardson· 1 shared Christoph F. SchmidtiD· 1 shared Daniel HaertteriD· 1 shared Daniel P. KiehartiD· 1 shared Faraz Ahmed ButtiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersDevelopmental Biology

Kenneth D. PossORCID

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2 papers

Recent·Most cited

Phased ERK-responsiveness and developmental robustness regulate teleost skin morphogenesis

Nitya Ramkumar, Christian Richardson, Makinnon O’Brien, Faraz Ahmed Butt, Jieun Park, Anna T. Chao, Michel Bagnat, Kenneth D. Poss, Stefano Di Talia

The paper studies ERK signaling dynamics in zebrafish periderm during axial elongation, finding stage-dependent responsiveness and developmental robustness.

Proceedings of the National Academy of Sciences · Mar 5, 2025Peer-reviewedDevelopmental Biology

DeepProjection: Rapid and structure-specific projections of tissue sheets embedded in 3D microscopy stacks using deep learning

Daniel Haertter, X. Wang, Stephanie M. Fogerson, Nitya Ramkumar, Janice M. Crawford, Kenneth D. Poss, Stefano Di Talia, Daniel P. Kiehart, Christoph F. Schmidt

DeepProjection extracts high-resolution content from 3D microscopy stacks by masking background, enabling dynamic tracking of tissue sheets in developmental biology.

bioRxiv · Nov 17, 2021 · PreprintDevelopmental Biology