Author

Daniel Yokosawa

BC Cancer AgencyORCID 0000-0002-4097-2096Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Approach:experimental assay· 1 Assay:flow cytometry· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Ryan R. BrinkmaniD· 2 shared Albina Rahim· 1 shared Alexander ButyaeviD· 1 shared Andrea CossarizzaiD· 1 shared Attila SzantneriD· 1 shared Bergur Finnbogason· 1 shared Chieh-Ting HsuiD· 1 shared David J. EckeriD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Ryan R. BrinkmanORCID

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2 papers

Recent·Most cited

Citizen science gamers enable automated flow cytometry gating through machine learning

Sebastiano Montante, Daniel Yokosawa, Leon Li, Alexander Butyaev, Mehrnoush Malek, Razzi Movassaghi, Quentin Michalchuk, Chieh-Ting Hsu, David Shmil, Albina Rahim, Andrea Cossarizza, Julia Boira Esteban, Kornél Erhart, Bergur Finnbogason, George Kelion, , Ryan R. Brinkman

The paper develops flowMagic, a machine learning tool for automated flow cytometry gating trained on expert data and citizen science gaming annotations, achieving high accuracy in cell population identification.

Cytometry Part A · Oct 29, 2026Peer-reviewedBioinformatics

Reproducible detection of antigen-specific T cells and Tregs via standardized and automated activation-induced marker assay workflows

Torin Halvorson, Gabrielle Boucher, Daniel Yokosawa, Jinqing Huang, Rosa García, Lieke Sanderink, Lan Chen, Lorraine Liu, J. Ernesto Fajardo-Despaigne, Jasper Halvorson, Ryan R. Brinkman, Suzanne Vercauteren, Sylvie Lesage, Jonathan L. Bramson, John David Rioux, , Megan K. Levings

This study improves the reproducibility of antigen-specific T cell detection using standardized AIM assay workflows and automated analysis tools.

Cell Reports Methods · May 19, 2026Peer-reviewedImmunology