Yuliya Shapovalova

The paper uses explainable AI on a genomic foundation model to identify RBP motifs influencing translation and mRNA decay in Drosophila.

The paper estimates mRNA half-lives in Drosophila embryos using RNA-seq time series and Gaussian process regression, showing correlations between mRNA stability and P-body association.

The paper introduces a non-parametric synergy model, Hand-GP, which outperforms existing parametric models in assessing drug and toxin combination effects.