Alina Kurjan

FlowBench evaluates agentic bioinformatics systems by decomposing performance into planning, fault recovery, interpretation, and output fidelity, revealing limitations in toolchain inference and fault handling.

This study uses spatial and single-cell transcriptomics to map cellular changes in human tendons across development and aging, identifying lineage-specific targets for therapeutic repair.

The paper creates a single-cell atlas of the healthy human Achilles tendon, identifying six fibroblast subtypes with distinct spatial distributions and transcriptional profiles.

This study uses single-nucleus RNA sequencing to analyze early cellular changes in human quadriceps tendons after rupture, identifying key cell types and pathways involved in the injury response.

FlowAgent automates bioinformatics workflows with an agent-based system, improving reproducibility and accessibility through intelligent decision-making and natural language interfaces.