Author

Stephen R. Davis

Livestock Improvement CorporationORCID 0000-0002-4942-1055Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Genetics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Assay:bulk RNA-seq· 3 Organism:bacteria (other)· 1 Research Focus:differential expression· 1 Research Focus:eQTL / molecular QTL mapping· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1 Assay:GWAS summary statistics· 1

Frequent Co-Authors

Kathryn TipladyiD· 4 shared Mathew D. LittlejohniD· 4 shared Thomas LopdelliD· 4 shared B.L. HarrisiD· 3 shared Christine CouldreyiD· 3 shared Richard J. SpelmaniD· 3 shared Russell G. SnelliD· 3 shared Thomas JohnsoniD· 3 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

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4 shared papersGenomics

Kathryn TipladyORCID

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4 papers

Recent·Most cited

GeneticsGenetics Selection EvolutionPeer-reviewedJan 24, 2022

Non-additive QTL mapping of lactation traits in 124,000 sequence-imputed cattle reveals novel recessive loci

Edwardo Reynolds, Thomas Lopdell, Yu Wang…·Mathew D. Littlejohn

The paper identifies novel recessive loci affecting lactation traits in cattle using non-additive QTL mapping on 124,000 sequence-imputed cows, revealing differences in genetic architecture between milk yield and composition traits.

20 citations

GWAS summary statisticsstatistical model

𝕏 PostBluesky

Molecular BiologyBMC GenomicsPeer-reviewedAug 26, 2020

A new mechanism for a familiar mutation - bovine DGAT1 K232A modulates gene expression through multi-junction exon splice enhancement

Tania Fink, Thomas Lopdell, Kathryn Tiplady…·Mathew D. Littlejohn

The paper re-examines the mechanism of the DGAT1 K232A mutation in bovine milk production, showing it modulates gene expression through splicing enhancement.

29 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky

GenomicsGenetics Selection EvolutionPeer-reviewedJan 24, 2019

Multiple QTL underlie milk phenotypes at the CSF2RB locus

Thomas Lopdell, Kathryn Tiplady, Christine Couldrey…·Mathew D. Littlejohn

The paper identifies multiple QTL at the CSF2RB locus associated with milk yield and composition traits in dairy cattle and explores their genetic and molecular mechanisms.

38 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky

GenomicsRNAPeer-reviewedDec 10, 2018

Widespread cis-regulation of RNA-editing in a large mammal

Thomas Lopdell, Victoria Hawkins, Christine Couldrey…·Mathew D. Littlejohn

The paper identifies cis-regulated RNA editing quantitative trait loci (edQTL) in cattle, linking them to gene expression and lactation traits.

11 citations

bacteria (other)bulk RNA-seq

𝕏 PostBluesky