Cristian Chaparro

This study analyzes histone modifications, chromatin accessibility, and transcription in Schistosoma mansoni gonads to uncover the histone code governing gene expression and reproductive development.

This study identifies transcriptomic plasticity in hybrid schistosomes and S. bovis across hosts, revealing genes and processes linked to zoonotic potential and host adaptation.

This study benchmarks four ChIP-seq methods in the Pacific oyster to identify the most effective for its chromatin structure.

The paper investigates how temperature during somatic embryo maturation in maritime pine affects DNA methylation patterns and whether these changes are mitotically transmitted to post-embryonic development.

The paper identifies and characterizes genomic safe harbor sites in Schistosoma mansoni to enable consistent transgene activity through CRISPR/Cas-assisted homology-directed repair.

The paper demonstrates that automated ChIPmentation can be applied to limited biological material from Schistosoma mansoni, with an operational limit of ≥20,000 cells.

The paper sequences, de novo assembles, and annotates the genome of the coral Pocillopora acuta, demonstrating the technical feasibility and cost-effectiveness of coral genome assembly.

The paper characterizes a hybrid schistosome in Europe, revealing its genomic composition and compatibility with hosts, and improves the genome assembly of its parental species.

Notos is a Galaxy tool that uses kernel density estimation to analyze CpN observed/expected ratios for inferring DNA methylation types from FASTA files.