Angélique D’Hont

HaploCharmer is a Snakemake workflow for read-scale haplotype calling in polyploids, validated on sugarcane and Saccharum data, identifying high-quality haplotypes with low false positives.

This paper compiles a genomic diversity catalogue of cultivated bananas using in silico chromosome painting, revealing intra-cultivar group variability and new genomic patterns.

This paper reports a telomere-to-telomere chromosome-scale assembly of the banana genome using Oxford Nanopore long-read sequencing.