Juan C. Muñoz-Sánchez

Species-specific barriers constrict Orsay virus host range across the Caenorhabditis genus

The paper maps eco-evolutionary barriers to Orsay virus host range across six Caenorhabditis species by analyzing viral life cycle dynamics and host competence phenotypes.

Reduced gravity and muon flux absence affect Caenorhabditis elegans life history traits and viral infection

This study examines how reduced gravity and muon flux affect viral infection and life history traits in Caenorhabditis elegans, revealing impacts on reproduction, morphology, and viral dynamics.

Quantifying defective and wild-type viruses from high-throughput RNA sequencing

The paper presents a method to quantify defective and wild-type viral genomes from RNA-seq data by analyzing depth deviations, providing whole-genome estimates of their proportions.

Story of an infection: viral dynamics and host responses in the Caenorhabditis elegans-Orsay virus pathosystem

This study tracks the progression of OrV infection in C. elegans, identifying four infection stages and gene expression changes, revealing virus-specific and general immune responses.

Accumulation dynamics of defective genomes during experimental evolution of two betacoronaviruses

This study tracks defective viral genome (DVG) dynamics in two betacoronaviruses under different MOI conditions, showing increased diversity and abundance with specific deletion patterns.