María J. Olmo-Uceda

The hidden diversity: Replication-strand asymmetry shapes short-term nucleotide and structural variation in an RNA virus

The paper characterizes replication dynamics and short-term evolutionary patterns of OrV, revealing strand asymmetry, mutational filtering, and non-standard genomes.

The interplay between Caenorhabditis elegans larval development and Orsay virus infection

This study investigates how Orsay virus infection affects Caenorhabditis elegans larval development and how molting periods influence viral replication.

Host replacement dynamics shape virulence and genome evolution in a plant RNA virus

This study examines how host replacement dynamics influence virulence and genome evolution in a plant RNA virus, showing that sudden transitions lead to faster virulence changes and more severe symptoms.

Taylor's power law rules the dynamics of allele frequencies during viral evolution in response to host changes

This study examines how host changes affect viral evolution by analyzing allele frequency dynamics and finding that Taylor's power law governs mutation distribution during host replacement.

Quantifying defective and wild-type viruses from high-throughput RNA sequencing

The paper presents a method to quantify defective and wild-type viral genomes from RNA-seq data by analyzing depth deviations, providing whole-genome estimates of their proportions.

Transcriptomic Insights into the Epigenetic Modulation of Turnip Mosaic Virus Evolution in Arabidopsis thaliana

The paper investigates how epigenetic modifications in Arabidopsis thaliana affect the evolution of Turnip Mosaic Virus, identifying gene expression patterns and viral targets.

Story of an infection: viral dynamics and host responses in the Caenorhabditis elegans-Orsay virus pathosystem

This study tracks the progression of OrV infection in C. elegans, identifying four infection stages and gene expression changes, revealing virus-specific and general immune responses.

Experimental evolution of an RNA virus in Caenorhabditis elegans

This study evolves two Orsay virus strains in C. elegans, finding slight infectivity changes, non-synonymous mutations, and non-random distribution of minor variants in polymorphic regions.