Author

Xinxin Zhu

Yale UniversityORCID 0000-0002-5673-9977Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:CRISPR screen· 1 Research Focus:database / resource· 1 Approach:machine learning (classical)· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Chuanpeng DongiD· 2 shared Di FengiD· 2 shared Hongyu ZhaoiD· 2 shared James Cai· 2 shared Nipun VermaiD· 2 shared Sidi CheniD· 2 shared Emily He· 1 shared Feifei Zhang· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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2 shared papersBioinformatics

Chuanpeng DongORCID

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2 papers

Recent·Most cited

TCPGdb: A comprehensive T cell perturbation genomics database for identification of critical T cell regulators

Chuanpeng Dong, Feifei Zhang, Kaiyuan Tang, Nipun Verma, Xinxin Zhu, Di Feng, James Cai, Hongyu Zhao, Sidi Chen

The paper introduces TCPGdb, a database integrating T cell perturbation screens to identify critical regulators of T cell function and anti-tumor persistence.

Cancer Immunology Research · Nov 21, 2025Peer-reviewedBioinformatics

Sensitive detection of synthetic response to cancer immunotherapy driven by gene paralog pairs

Chuanpeng Dong, Feifei Zhang, Emily He, Ping Ren, Nipun Verma, Xinxin Zhu, Di Feng, James Cai, Hongyu Zhao, Sidi Chen

The paper identifies paralog pairs that enhance cancer immunotherapy efficacy through computational analysis and experimental validation.

Patterns · Feb 25, 2025Peer-reviewedBioinformatics