Author

Di Feng

Yale UniversityORCID 0000-0002-0964-9995Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 3 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:CRISPR screen· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Chuanpeng DongiD· 2 shared Hongyu ZhaoiD· 2 shared James Cai· 2 shared Nipun VermaiD· 2 shared Sidi CheniD· 2 shared Xinxin ZhuiD· 2 shared Abhishek S. KashyapiD· 1 shared Alexandra NabaiD· 1 shared

Activity by Year

2025-2025 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Chuanpeng DongORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsCancer Immunology ResearchPeer-reviewedNov 21, 2025

TCPGdb: A comprehensive T cell perturbation genomics database for identification of critical T cell regulators

Chuanpeng Dong, Feifei Zhang, Kaiyuan Tang…·Sidi Chen

The paper introduces TCPGdb, a database integrating T cell perturbation screens to identify critical regulators of T cell function and anti-tumor persistence.

DOI 10.1158/2326-6066.cir-25-0168

humanbulk RNA-seq

𝕏 PostBluesky

Cancer BiologybioRxivPreprintAug 22, 2025

In-depth proteomic profiling of the extracellular matrix of pancreatic ductal adenocarcinomas identifies signatures correlating with lymphocyte infiltration

James M. Considine, Dharma Pally, Sarah A. O’Brien…·Alexandra Naba

This study identifies ECM protein signatures in PDAC that correlate with CD8+ T-cell infiltration and patient survival.

2 citations

mousehuman

𝕏 PostBluesky

BioinformaticsPatternsPeer-reviewedFeb 25, 2025

Sensitive detection of synthetic response to cancer immunotherapy driven by gene paralog pairs

Chuanpeng Dong, Feifei Zhang, Emily He…·Sidi Chen

The paper identifies paralog pairs that enhance cancer immunotherapy efficacy through computational analysis and experimental validation.

1 citation

humanCRISPR screen

𝕏 PostBluesky