Casey P. Shannon

This study integrates spatiotemporal data from skin and blood to reveal BCG-induced molecular networks and predictive biomarkers of vaccine response.

This study identifies immune subtypes in hospitalized COVID-19 patients linked to clinical outcomes and long COVID risk through longitudinal multi-omics analysis.

The paper identifies protein biomarkers for spinal cord injury severity and recovery using proteomic analysis of human and porcine samples, showing high predictive accuracy.

DIABLO identifies multi-omics biomarker panels to distinguish phenotypic groups, showing better biological enrichment than other methods in simulated and real datasets.

This paper introduces a multi-response Gaussian model to predict peripheral whole blood composition from Affymetrix Gene ST expression profiles, outperforming existing methods on this platform.