Eva K.F. Chan

The paper presents a high-quality chromosome-level genome assembly, DNA methylome, and cranial morphology analysis of an Alpine dingo, supporting its status as an archetype for evolutionary studies.

The paper presents a desert dingo genome assembly and compares it to domestic dog genomes, identifying structural variants and physiological differences linked to ecological roles.

Shiny-SoSV predicts the performance of somatic structural variant detection based on parameters like sequencing depth and variant allele fraction.

This paper reviews eight somatic structural variant callers, evaluating their sensitivity and precision across different SV types, sizes, and sequencing conditions.

The paper uses whole genome optical mapping to reveal complex chained fusion events and novel sequences in cancer genomes that are not detected by short-read sequencing.