Author

Ankita Kothari

Lawrence Berkeley National LaboratoryORCID 0000-0002-6241-5821Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:host-pathogen & immune response· 1 Assay:metabolomics· 1 Assay:metagenomics· 1 Assay:proteomics· 1

Frequent Co-Authors

Aindrila MukhopadhyayiD· 3 shared Adam M. DeutschbaueriD· 2 shared Adam P. ArkiniD· 1 shared Albert Tang· 1 shared Alex CodikiD· 1 shared Alex J. RivieriD· 1 shared Andrea M. Rocha· 1 shared Aparajitha SrinivasaniD· 1 shared

Activity by Year

2017-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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3 shared papersMicrobiology

Aindrila MukhopadhyayORCID

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintMay 10, 2025

Novel origin of replication for environmentally isolated Pantoea strain enables expression of heterologous proteins, pathways and products

Alex Codik, Ankita Kothari, Hualan Liu…·Aindrila Mukhopadhyay

The paper identifies and validates novel plasmid origins of replication from an environmental Pantoea strain, enabling expression of heterologous proteins and pathways in both model and non-model bacteria.

DOI 10.1101/2025.05.10.653210

bacteria (other)proteomics

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Molecular BiologymSystemsPeer-reviewedDec 16, 2019

Native plasmid-encoded mercury resistance genes are functional and demonstrate natural transformation in environmental bacterial isolates

Ankita Kothari, Drishti Soneja, Albert Tang…·Aindrila Mukhopadhyay

The paper validates a native plasmid-encoded mercury resistance operon in groundwater bacteria and identifies strains capable of natural transformation.

13 citations

experimental assay

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MicrobiologybioRxivPreprintMar 8, 2017

Plasmid DNA analysis of pristine groundwater microbial communities reveal extensive presence of metal resistance genes

Ankita Kothari, Yu-Wei Wu, Marimikel Charrier…·Aindrila Mukhopadhyay

The paper analyzes plasmid DNA from groundwater to identify metal resistance genes, finding abundant mercury resistance genes despite low mercury levels.

DOI 10.1101/113860

metagenomicsexperimental assay

𝕏 PostBluesky