Author

Andrew J. Tock

University of CambridgeORCID 0000-0002-6590-8314Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 4 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 5 Approach:experimental assay· 3 Research Focus:gene regulatory network inference· 3 Approach:statistical model· 3 Assay:ChIP-seq· 2 Research Focus:differential expression· 2 Assay:DNA methylation· 2 Assay:whole-genome sequencing· 2

Frequent Co-Authors

Ian R. HendersoniD· 5 shared Christophe LambingiD· 3 shared Detlef WeigeliD· 2 shared Kyuha ChoiiD· 2 shared Matthew NaishiD· 2 shared Pallas C. KuoiD· 2 shared Piotr WłodzimierziD· 2 shared Robert A. MartiensseniD· 2 shared

Activity by Year

2018-2024 · peak 2/yr

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10 top collaborators · 32 mutual co-author links

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5 shared papersGenomics

Ian R. HendersonORCID

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5 papers

Recent·Most cited

Structural variation and DNA methylation shape the centromere-proximal meiotic crossover landscape in Arabidopsis

Joiselle Blanche Fernandes, Matthew Naish, Qichao Lian, Robin Burns, Andrew J. Tock, Fernando A. Rabanal, Piotr Włodzimierz, Anette Habring, Robert E. Nicholas, Detlef Weigel, Raphaël Mercier, Ian R. Henderson

The paper maps meiotic crossover landscapes near centromeres in Arabidopsis, showing suppression linked to structural variation and DNA methylation.

Genome biology · Jan 22, 2024Peer-reviewedGenomics

The genetic and epigenetic landscape of the Arabidopsis centromeres

Matthew Naish, Michael Alonge, Piotr Włodzimierz, Andrew J. Tock, Bradley W. Abramson, Anna Schmücker, Terezie M. Mandáková, Bhagyshree Jamge, Christophe Lambing, Pallas C. Kuo, Natasha Yelina, Nolan T. Hartwick, Kelly Colt, Lisa M. Smith, Jurriaan Ton, , Ian R. Henderson

Ultra-long-read sequencing resolves Arabidopsis centromeres, revealing their genetic and epigenetic structure and dynamics.

Science · Nov 11, 2021Peer-reviewedGenomics

An ultra high-density Arabidopsis thaliana crossover map that refines the influences of structural variation and epigenetic features

Beth A. Rowan, Darren Heavens, Tatiana R. Feuerborn, Andrew J. Tock, Ian R. Henderson, Detlef Weigel

The paper generates a high-density crossover map in Arabidopsis thaliana to study how structural variants and epigenetic features influence meiotic crossover positioning.

Genetics · Sep 16, 2019Peer-reviewedGenetics

REC8-cohesin, chromatin and transcription orchestrate meiotic recombination in the Arabidopsis genome

Christophe Lambing, Andrew J. Tock, Kyuha Choi, Stephanie D. Topp, Pallas C. Kuo, Alexander R. Blackwell, Xiaohui Zhao, Kim Osman, James D. Higgins, F. Chris H. Franklin, Ian R. Henderson

The paper investigates how REC8-cohesin interacts with chromatin and transcription to regulate meiotic recombination in Arabidopsis.

bioRxiv · Jan 4, 2019 · PreprintGenomics

Nucleosomes and DNA methylation shape meiotic DSB frequency in Arabidopsis transposons and gene regulatory regions

Kyuha Choi, Xiaohui Zhao, Andrew J. Tock, Christophe Lambing, Charles J. Underwood, Thomas J. Hardcastle, Heïdi Serra, Juhyun Kim, Hyun Seob Cho, Jaeil Kim, Piotr A. Ziółkowski, Nataliya E. Yelina, Ildoo Hwang, Robert A. Martienssen, Ian R. Henderson

The paper maps meiotic DSBs in Arabidopsis using SPO11-1-oligonucleotides and shows their association with chromatin features and transposon activity.

Genome Research · Apr 1, 2018Peer-reviewedGenomics