Nina Overgaard Therkildsen

BLink-seq delivers population-scale haplotypes without long reads: a scalable framework for non-model genomics

BLink-seq is a scalable Haplotagging method for generating phased haplotypes and detecting structural variants in non-model species using short-read sequencing.

Genetic differentiation is constrained to chromosomal inversions and putative centromeres in locally adapted populations with higher gene flow

This study shows that genetic differentiation in Atlantic silverside fish is concentrated in chromosomal inversions and centromeres, especially under higher gene flow, supporting their role in adaptive divergence.

Chromosome-level assembly of the Atlantic silverside genome reveals extreme levels of sequence diversity and structural genetic variation

The paper presents a chromosome-level genome assembly of the Atlantic silverside and reports high heterozygosity and extensive structural variation linked to local adaptation.