Aurélien Bègue

High-throughput multi-camera array microscope platform for automated 3D behavioral analysis of swimming zebrafish larvae

This paper introduces a high-throughput 24-camera array microscope for automated 3D behavioral analysis of zebrafish larvae, enabling accurate tracking and morphological dynamics at high frame rates.

High-Throughput Tracking of Freely Moving Drosophila Reveals Variations in Aggression and Courtship Behaviors

This paper develops a high-throughput imaging and analysis pipeline to quantify aggression and courtship behaviors in freely moving Drosophila, revealing genotype-specific behavioral variations.

Parallelized Brightfield and Fluorescence Imaging of Organoids Using a Scalable Multi-Camera Platform

The paper introduces a multi-camera array scanner (MCAS) that significantly reduces imaging time for organoids, enabling faster and more consistent analysis of growth and responses to treatments.

Automated, high-throughput quantification of EGFP-expressing neutrophils in zebrafish by machine learning and a highly-parallelized microscope

This paper develops a high-throughput method to count EGFP-expressing neutrophils in zebrafish larvae using a parallelized microscope and machine learning, validated against manual counts.