Author

Shuqi Diao

South China Agricultural UniversityORCID 0000-0002-7017-7595Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Research Focus:GWAS / association mapping· 2 Organism:plant (other)· 2 Research Focus:database / resource· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Bingjie LiiD· 3 shared George E. LiuiD· 3 shared Goutam SahanaiD· 3 shared Jinyan TengiD· 3 shared Mogens Sandø LundiD· 3 shared Qing LiniD· 3 shared Ruidong XiangiD· 3 shared Yahui GaoiD· 3 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenetics

Bingjie LiORCID

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3 papers

Recent·Most cited

The ChickenGTEx pilot analysis: a reference of regulatory variants across 28 chicken tissues

Dailu Guan, Zhonghao Bai, Xiaoning Zhu, Conghao Zhong, Yali Hou, Di Zhu, Houcheng Li, Fangren Lan, Shuqi Diao, Yuelin Yao, Bingru Zhao, Xiaochang Li, Zhangyuan Pan, Yahui Gao, Yuzhe Wang, , Lingzhao Fang

The ChickenGTEx project provides a multi-tissue reference of regulatory variants in chicken, analyzing their functional impacts and utility in genetics, genomics, and evolutionary studies.

Nature Genetics · Apr 8, 2025Peer-reviewedGenetics

Integrating large-scale meta-GWAS and PigGTEx resources to decipher the genetic basis of complex traits in pig.

Zhiting Xu, Qing Lin, Xiaodian Cai, Zhanming Zhong, Jinyan Teng, Bingjie Li, Haonan Zeng, Yahui Gao, Zexi Cai, Xiaoqing Wang, Liangyu Shi, Xue Wang, Yi Wang, Zipeng Zhang, Yu Lin, , Zhe Zhang

The paper performs a multi-breed meta-GWAS in pigs to identify genomic regions associated with complex traits and integrates with PigGTEx to prioritize variant-gene-tissue-trait circuits.

National Science Review · Feb 14, 2025Peer-reviewedGenetics

A compendium of genetic regulatory effects across pig tissues

Jinyan Teng, Yahui Gao, Hongwei Holly Yin, Zhonghao Bai, Shuli Liu, Haonan Zeng, Lijing Bai, Zexi Cai, Bingru Zhao, Xiujin Li, Zhiting Xu, Qing Lin, Zhangyuan Pan, Wenjing Yang, Xiaoshan Yu, , George E. Liu

The paper presents PigGTEx, a resource linking genetic variants to transcriptomic phenotypes in pigs, showing pigs' similarity to humans in gene regulation and complex traits.

Nature Genetics · Jan 1, 2024Peer-reviewedGenomics