Author

Ekin Güney

University of California, San FranciscoORCID 0000-0002-7050-0831Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 2 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:human· 2 Assay:scRNA-seq· 2 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:CUT&Tag· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

William A. WeissiD· 3 shared Ronald Phua· 2 shared Àlex Tudoras· 1 shared Alexandre Gaspar‐MaiaiD· 1 shared Anna Victoria MolofskyiD· 1 shared Brian L. GudenasiD· 1 shared Caroline C. EscoubasiD· 1 shared Dara Siegel· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersCancer Biology

William A. WeissORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintSep 17, 2026

Local Tumor Microenvironment Niches Correlate with Survival and Immunotherapy Response in Human Glioblastoma

Florent Petitprez, Nicola Graham, Sheila Webb…·Jeffrey W. Pollard

The paper identifies six distinct tumor microenvironment niches in glioblastoma that correlate with patient survival and immunotherapy response.

DOI 10.64898/2026.02.23.707276

humanspatial transcriptomics

Cancer BiologybioRxivPreprintDec 8, 2025

Human stem cell models for group 3 medulloblastoma uncover JARID1B as a regulator of the chromatin landscape.

Zulekha A. Qadeer, Elise Hou, Dara Siegel…·William A. Weiss

DOI 10.64898/2025.12.06.689939

NeurosciencebioRxivPreprintOct 1, 2025

NOVA: a novel R-package enabling multi-parameter analysis and visualization of neural activity in MEA recordings

Caroline C. Escoubas, Ekin Güney, Àlex Tudoras…·William A. Weiss

NOVA is an R-package for analyzing MEA data, offering dimensionality reduction, clustering, and trajectory mapping, revealing network burst duration as a key activity metric.

DOI 10.1101/2025.10.01.679841

electronic health recordsstatistical model