Author

James T. Sorrentino

Griffith UniversityORCID 0000-0002-7058-9987Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:metagenomics· 1 Assay:proteomics· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Austin W.T. ChiangiD· 3 shared Benjamin P. KellmaniD· 3 shared Bokan BaoiD· 3 shared Nathan E. LewisiD· 3 shared Yujie ZhangiD· 3 shared Amy Sze Pui TamiD· 1 shared Andrea CastroiD· 1 shared Anthony AylwardiD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersGenetics

Austin W.T. ChiangORCID

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Author profile →

3 papers

Recent·Most cited

Protein structure, a genetic encoding for glycosylation

Benjamin P. Kellman, Daniel R. Sandoval, Olga O. Zaytseva, Kelly P. Brock, Sabyasachi Baboo, Daniela Nachmanson, Edward B. Irvine, Sanne Schoffelen, Erick Armingol, Nathan Mih, Yujie Zhang, Mia Jeffris, Philip Bartels, Thi Nguyen, Amy Sze Pui Tam, , Nathan E. Lewis

The paper identifies a relationship between protein structure and glycan structure, introducing a glycoimpact matrix to predict glycosylation patterns and validate it through disease variants and engineered antibodies.

bioRxiv · May 15, 2024 · PreprintGenetics

Preparing glycomics data for robust statistical analysis with GlyCompareCT

Yujie Zhang, Sridevi Krishnan, Bokan Bao, Austin W.T. Chiang, James T. Sorrentino, Song‐Min Schinn, Benjamin P. Kellman, Nathan E. Lewis

GlyCompareCT preprocesses glycomics data to address sparsity and non-independence, improving statistical power for downstream analysis.

STAR Protocols · Mar 13, 2023Peer-reviewedBioinformatics

A consensus-based and readable extension of Linear Code for Reaction Rules (LiCoRR)

Benjamin P. Kellman, Yujie Zhang, Emma Logomasini, Eric Meinhardt, Karla P. Godinez‐Macias, Austin W.T. Chiang, James T. Sorrentino, Chenguang Liang, Bokan Bao, Yusen Zhou, Sachiko Akase, Isami Sogabe, Thukaa Kouka, Elizabeth A Winzeler, Iain B. H. Wilson, , Nathan E. Lewis

This paper extends Linear Code to represent reaction rules in glycobiology, aiming to improve consistency and interoperability in glycan synthesis models.

Beilstein Journal of Organic Chemistry · Oct 27, 2020Peer-reviewedSystems Biology