Nathan Mih

Protein structure, a genetic encoding for glycosylation

The paper identifies a relationship between protein structure and glycan structure, introducing a glycoimpact matrix to predict glycosylation patterns and validate it through disease variants and engineered antibodies.

Establishing comprehensive quaternary structural proteomes from genome sequence

The paper develops QSPACE, a computational platform to annotate quaternary structural proteomes at genome-scale using structural resources and mutation data, demonstrating its application on E. coli.

Cellular responses to reactive oxygen species can be predicted on multiple biological scales from molecular mechanisms

The paper develops a quantitative framework to predict ROS stress responses in E. coli across molecular, network, and genetic levels.

ssbio: A Python Framework for Structural Systems Biology

The paper introduces ssbio, a Python framework for integrating structural biology data into genome-scale systems biology workflows.