Author

Tyler D. Ross

University of Wisconsin–MadisonORCID 0000-0002-7128-152XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 3 Synthetic Biology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1 Organism:human· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Ophelia S. VenturelliiD· 4 shared Brennan G. Keogh· 1 shared Briana M. BurtoniD· 1 shared Christopher A. KlausmeieriD· 1 shared Freeman LaniD· 1 shared Hanhyeok ImiD· 1 shared Jason SabaiD· 1 shared Job L. Grant· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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4 shared papersSystems Biology

Ophelia S. VenturelliORCID

Mutual co-authors in cluster

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4 papers

Recent·Most cited

Metabolic interplay drives population cycles in a cross-feeding microbial community

Tyler D. Ross, Hanhyeok Im, Brennan G. Keogh, Christopher A. Klausmeier, Ophelia S. Venturelli

The paper demonstrates population cycles in a cross-feeding microbial community using an engineered system and a nonlinear dynamical model.

Nature Communications · Oct 7, 2025Peer-reviewedSystems Biology

Programming bacteria to sense environmental DNA for multiplexed pathogen detection

Yu‐Yu Cheng, Zhengyi Chen, Xinyun Cao, Tyler D. Ross, Tanya G. Falbel, Briana M. Burton, Ophelia S. Venturelli

This paper develops DNA sensors in Bacillus subtilis to detect environmental DNA from multiple pathogens with high specificity and sensitivity, using fluorescent reporters for multiplexed detection.

Nature Communications · Apr 10, 2023Peer-reviewedSynthetic Biology

High-throughput single-cell sequencing of multiple invertible promoters reveals a strong determinant of bacterial population heterogeneity

Freeman Lan, Jason Saba, Yili Qian, Tyler D. Ross, Robert C. Landick, Ophelia S. Venturelli

The paper uses high-throughput single-cell sequencing to show promoter inversion rates drive population heterogeneity in Bacteroides spp.

bioRxiv · Oct 31, 2022 · PreprintSystems Biology

Investigating the dynamics of microbial consortia in spatially structured environments

Sonali Gupta, Tyler D. Ross, Marcella M. Gomez, Job L. Grant, Philip A. Romero, Ophelia S. Venturelli

This study uses a microfluidic platform to quantify how spatial arrangement affects gene expression and growth in microbial consortia, showing distance acts as a low-pass filter and feedback mechanisms influence synchronization.

Nature Communications · May 15, 2020Peer-reviewedSystems Biology