Transcriptional analysis of sodium valproate in a serotonergic cell line reveals gene regulation through both HDAC inhibition-dependent and independent mechanisms
Priyanka Sinha, Simone L. Cree, Allison L. Miller…·Martin Alexander Kennedy
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University of OtagoORCID 0000-0002-7349-422XUnclaimed ORCID profile · follow to get notified of new preprints
5 papers
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Priyanka Sinha, Simone L. Cree, Allison L. Miller…·Martin Alexander Kennedy
Yusmiati Liau, Simone L. Cree, Simran D. S. Maggo…·Martin Alexander Kennedy
The paper develops a multiplex pharmacogenetics assay using MinION nanopore sequencing to genotype variants related to clopidogrel and warfarin, achieving >90% accuracy for most variants.
Yusmiati Liau, Simran D. S. Maggo, Allison L. Miller…·Simone L. Cree
This study uses nanopore sequencing to genotype CYP2D6, accurately haplotype alleles, and detect duplications by analyzing allelic balance.
Kim N. T. Ton, Simone L. Cree, Sabine Gronert–Sum…·Martin Alexander Kennedy
The paper develops a method for HLA-B typing using nanopore sequencing and demonstrates its application in Maori and Polynesian populations.
Lucy C. de Jong, Simone L. Cree, Vanessa Lattimore…·Logan C. Walker
The paper uses nanopore sequencing to analyze full-length BRCA1 mRNA transcripts, identifying novel isoforms and co-occurring exon skipping events.